Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 MEIS3P1-201ENST00000495167 958 ntBASIC11□□□□□ -0.65
HHLA3Q9XRX5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 AC009407.1-201ENST00000568958 598 ntBASIC11□□□□□ -0.65
HHLA3Q9XRX5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 AC015910.1-201ENST00000579400 975 ntBASIC11□□□□□ -0.65
HHLA3Q9XRX5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 AL139385.1-201ENST00000611744 3272 ntBASIC11□□□□□ -0.65
HHLA3Q9XRX5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 MAPT-IT1-201ENST00000624111 3016 ntBASIC11□□□□□ -0.65
HHLA3Q9XRX5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
HHLA3Q9XRX5 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11□□□□□ -0.65
HHLA3Q9XRX5 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AC005498.2-205ENST00000593218 784 ntBASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
HHLA3Q9XRX5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms