Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.17□□□□□ -0.14
RIMS3Q9UJD0 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 TOMM22P5-201ENST00000416399 439 ntBASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 CNN2P11-201ENST00000429351 262 ntBASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 LINC01115-203ENST00000606068 577 ntBASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RIMS3Q9UJD0 AL360270.3-201ENST00000609118 1348 ntBASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 AC067750.1-201ENST00000608826 6545 ntBASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RIMS3Q9UJD0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms