Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC023051.2-201ENST00000541141 460 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC063977.2-201ENST00000601996 421 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AL078624.1-201ENST00000604004 547 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC245369.8-201ENST00000636589 306 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 OR2W2P-201ENST00000406313 909 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 EEF1DP2-201ENST00000433698 843 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC113398.1-201ENST00000464124 406 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 PMM2-216ENST00000569958 698 ntTSL 2 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 AL121992.3-201ENST00000606186 346 ntBASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RIMBP3Q9UFD9 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 AC139712.1-201ENST00000378256 1875 ntBASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RIMBP3Q9UFD9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 RPS6-201ENST00000315377 863 ntTSL 3 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 MKL1-204ENST00000402630 747 ntTSL 2 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 AC005011.1-201ENST00000455206 210 ntBASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 AC105424.1-201ENST00000514583 209 ntBASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 HNRNPA1P7-201ENST00000521273 963 ntBASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 AC004923.4-201ENST00000532296 739 ntTSL 3 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 GOLGA8UP-201ENST00000527159 1755 ntBASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 AL133373.2-201ENST00000623187 2828 ntBASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.55■■□□□ 1.2
RIMBP3Q9UFD9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 HNRNPA3P12-201ENST00000437410 1063 ntBASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 AC012513.2-201ENST00000441511 1137 ntBASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 AC008620.2-201ENST00000510294 1569 ntBASIC22.54■■□□□ 1.2
RIMBP3Q9UFD9 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms