Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AC063952.3-201ENST00000467756 308 ntBASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 MRPL22P1-201ENST00000505398 616 ntBASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AP000911.2-201ENST00000534330 502 ntBASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AC009955.4-201ENST00000597192 544 ntBASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 AP001184.1-201ENST00000637936 376 ntBASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CNTNAP3Q9BZ76 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CNTNAP3Q9BZ76 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 FRMPD2B-201ENST00000431305 1347 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AL807761.2-201ENST00000422849 729 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 RBPMSLP-201ENST00000433427 502 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 VDAC1P1-201ENST00000439229 848 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AP005264.6-204ENST00000588436 719 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AC020922.4-201ENST00000621389 339 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AC092364.2-201ENST00000596710 2692 ntBASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CNTNAP3Q9BZ76 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AF274858.1-201ENST00000406288 372 ntBASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AC026470.1-201ENST00000478038 846 ntBASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC14.19□□□□□ -0.14
CNTNAP3Q9BZ76 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms