Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 GHSR-202ENST00000427970 912 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 CTBP2P5-201ENST00000454986 1264 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 RN7SL48P-201ENST00000579283 293 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 GNRHR2-203ENST00000581100 1187 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 MIR6775-201ENST00000617557 69 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 RHOXF1P1-202ENST00000635473 501 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 MSTO2P-201ENST00000314835 1709 ntBASIC10.49□□□□□ -0.73
UPK3BQ9BT76 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
UPK3BQ9BT76 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 RNU1-114P-201ENST00000365297 166 ntBASIC10.48□□□□□ -0.73
UPK3BQ9BT76 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 CD8B2-202ENST00000417670 633 ntBASIC10.48□□□□□ -0.73
UPK3BQ9BT76 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 RPS2P32-201ENST00000439199 892 ntBASIC10.48□□□□□ -0.73
UPK3BQ9BT76 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 AC119751.2-201ENST00000504529 210 ntBASIC10.48□□□□□ -0.73
UPK3BQ9BT76 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC10.48□□□□□ -0.73
UPK3BQ9BT76 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms