Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 LINC01101-201ENST00000622953 1884 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 MROH4P-201ENST00000431302 1578 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN18Q99952 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.74■□□□□ 0.27
PTPN18Q99952 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 RNA5SP406-201ENST00000516106 112 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PTPN18Q99952 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.74■□□□□ 0.27
PTPN18Q99952 AL118522.1-201ENST00000611368 560 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.74■□□□□ 0.27
PTPN18Q99952 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 AC023024.2-201ENST00000623561 1993 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 BRD7P5-201ENST00000299197 1822 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PTPN18Q99952 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.74■□□□□ 0.27
PTPN18Q99952 AC006504.5-208ENST00000588784 2401 ntBASIC16.74■□□□□ 0.27
PTPN18Q99952 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN18Q99952 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN18Q99952 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 PYY2-201ENST00000315776 282 ntBASIC16.73■□□□□ 0.27
PTPN18Q99952 SURF4-203ENST00000371991 715 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC16.73■□□□□ 0.27
PTPN18Q99952 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 AC095040.1-201ENST00000513286 675 ntBASIC16.73■□□□□ 0.27
PTPN18Q99952 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC16.73■□□□□ 0.27
PTPN18Q99952 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 LINC00244-201ENST00000625073 613 ntBASIC16.73■□□□□ 0.27
PTPN18Q99952 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN18Q99952 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.73■□□□□ 0.27
PTPN18Q99952 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 AC139712.1-201ENST00000378256 1875 ntBASIC16.73■□□□□ 0.27
PTPN18Q99952 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 AL136172.1-201ENST00000598590 1394 ntBASIC16.73■□□□□ 0.27
PTPN18Q99952 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN18Q99952 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PTPN18Q99952 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.73■□□□□ 0.27
PTPN18Q99952 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTPN18Q99952 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
PTPN18Q99952 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN18Q99952 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.72■□□□□ 0.27
PTPN18Q99952 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN18Q99952 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTPN18Q99952 AC112693.3-201ENST00000624819 1983 ntBASIC16.72■□□□□ 0.27
PTPN18Q99952 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTPN18Q99952 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.72■□□□□ 0.27
PTPN18Q99952 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN18Q99952 GNG10P1-201ENST00000452289 199 ntBASIC16.72■□□□□ 0.27
PTPN18Q99952 RN7SL23P-201ENST00000484055 275 ntBASIC16.72■□□□□ 0.27
PTPN18Q99952 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.72■□□□□ 0.27
PTPN18Q99952 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PTPN18Q99952 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.72■□□□□ 0.27
PTPN18Q99952 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PTPN18Q99952 SIGLEC22P-201ENST00000599104 714 ntBASIC16.72■□□□□ 0.27
PTPN18Q99952 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms