Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.37□□□□□ -0.11
CDC6Q99741 ALG3P1-201ENST00000508806 1114 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.37□□□□□ -0.11
CDC6Q99741 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 AL109837.1-201ENST00000603272 613 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 AC005632.3-201ENST00000605544 308 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDC6Q99741 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 AC024909.3-201ENST00000611513 2257 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.37□□□□□ -0.11
CDC6Q99741 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDC6Q99741 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.37□□□□□ -0.11
CDC6Q99741 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDC6Q99741 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.37□□□□□ -0.11
CDC6Q99741 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDC6Q99741 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 AC112504.1-201ENST00000623415 1841 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 CAP2P1-201ENST00000557743 1390 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC6Q99741 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDC6Q99741 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC6Q99741 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CDC6Q99741 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 RN7SKP230-201ENST00000365642 335 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 CHCHD2P9-201ENST00000461726 456 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.36□□□□□ -0.11
CDC6Q99741 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC6Q99741 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
CDC6Q99741 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.36□□□□□ -0.11
CDC6Q99741 AC093752.3-201ENST00000567343 901 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC6Q99741 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 AC138894.2-201ENST00000602838 371 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 AC087392.5-201ENST00000612517 489 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 MIR6842-201ENST00000612539 65 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 AL157813.1-201ENST00000612996 587 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 AC007718.1-201ENST00000621078 280 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 AC027601.3-201ENST00000622907 509 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CDC6Q99741 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC6Q99741 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 AC012508.2-201ENST00000567613 1472 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 C8orf49-201ENST00000525043 1968 ntBASIC14.36□□□□□ -0.11
CDC6Q99741 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDC6Q99741 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.36□□□□□ -0.11
CDC6Q99741 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.36□□□□□ -0.11
CDC6Q99741 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CDC6Q99741 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC6Q99741 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CDC6Q99741 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.35□□□□□ -0.11
CDC6Q99741 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 PAUPAR-201ENST00000630360 2965 ntBASIC14.35□□□□□ -0.11
CDC6Q99741 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CDC6Q99741 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms