Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 AC007969.1-201ENST00000433675 447 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 AC114812.1-204ENST00000449669 728 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 BRI3BPP1-201ENST00000594224 787 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 AC008738.7-201ENST00000609744 511 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 MIR6074-201ENST00000612054 107 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.67□□□□□ -0.54
TRGV9Q99603 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TRGV9Q99603 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SALL4P5-201ENST00000419001 1760 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC11.67□□□□□ -0.54
TRGV9Q99603 AC022144.1-201ENST00000602255 1580 ntBASIC11.67□□□□□ -0.54
TRGV9Q99603 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TRGV9Q99603 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
TRGV9Q99603 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 MYADML-201ENST00000474610 2147 ntBASIC11.66□□□□□ -0.54
TRGV9Q99603 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 AC011840.2-201ENST00000563063 1520 ntBASIC11.66□□□□□ -0.54
TRGV9Q99603 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRGV9Q99603 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
TRGV9Q99603 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV9Q99603 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV9Q99603 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
TRGV9Q99603 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
TRGV9Q99603 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
TRGV9Q99603 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.66□□□□□ -0.54
TRGV9Q99603 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
TRGV9Q99603 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.66□□□□□ -0.54
TRGV9Q99603 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms