Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC107464.3-201ENST00000609172 737 ntBASIC15.17■□□□□ 0.02
PHOX2BQ99453 AC073592.2-201ENST00000623062 780 ntBASIC15.17■□□□□ 0.02
PHOX2BQ99453 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.17■□□□□ 0.02
PHOX2BQ99453 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PHOX2BQ99453 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC010491.1-201ENST00000563101 2797 ntBASIC15.16■□□□□ 0.02
PHOX2BQ99453 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 SNX15-201ENST00000352068 771 ntTSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 POM121L8P-201ENST00000417732 1281 ntBASIC15.16■□□□□ 0.02
PHOX2BQ99453 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC007919.2-201ENST00000444110 511 ntBASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC004686.1-201ENST00000605113 538 ntBASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC005632.3-201ENST00000605544 308 ntBASIC15.16■□□□□ 0.02
PHOX2BQ99453 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 AC006213.5-201ENST00000619673 288 ntBASIC15.16■□□□□ 0.02
PHOX2BQ99453 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PHOX2BQ99453 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.16■□□□□ 0.02
PHOX2BQ99453 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 COX20P1-201ENST00000366529 357 ntBASIC15.15■□□□□ 0.02
PHOX2BQ99453 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 MIR3677-201ENST00000578964 60 ntBASIC15.15■□□□□ 0.02
PHOX2BQ99453 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 AL109837.1-201ENST00000603272 613 ntBASIC15.15■□□□□ 0.02
PHOX2BQ99453 AL136295.7-201ENST00000619226 1200 ntBASIC15.15■□□□□ 0.02
PHOX2BQ99453 TMEM14EP-202ENST00000639378 1296 ntBASIC15.15■□□□□ 0.02
PHOX2BQ99453 LRRC59-203ENST00000576448 1531 ntBASIC15.15■□□□□ 0.02
PHOX2BQ99453 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PHOX2BQ99453 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.15■□□□□ 0.02
PHOX2BQ99453 IL9RP3-201ENST00000442856 1674 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms