Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 CICP23-201ENST00000605013 2741 ntBASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AC073869.2-201ENST00000417338 1026 ntBASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 RN7SL277P-201ENST00000481521 288 ntBASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AC141586.1-203ENST00000567242 366 ntBASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 DBP-202ENST00000593500 712 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AL591471.1-201ENST00000621855 229 ntBASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CRAMP1Q96RY5 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AC006504.5-208ENST00000588784 2401 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AC092580.1-201ENST00000433998 658 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AC004837.1-201ENST00000446267 564 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 RPL18AP8-201ENST00000486071 528 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 ALG1L13P-202ENST00000519320 584 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 AC005357.2-202ENST00000590507 1060 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 ACE3P-201ENST00000423435 1973 ntBASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CRAMP1Q96RY5 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CRAMP1Q96RY5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms