Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AC004877.2-201ENST00000623941 599 ntBASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TBC1D16-201ENST00000310924 10936 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
AP1S3Q96PC3 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 EEF1DP4-201ENST00000446006 880 ntBASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 RNA5SP415-201ENST00000517246 115 ntBASIC11.38□□□□□ -0.59
AP1S3Q96PC3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 BX537318.2-201ENST00000624893 4162 ntBASIC11.38□□□□□ -0.59
AP1S3Q96PC3 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
AP1S3Q96PC3 CES1P1-201ENST00000421606 1704 ntBASIC11.38□□□□□ -0.59
AP1S3Q96PC3 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
AP1S3Q96PC3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms