Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRIM47Q96LD4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM47Q96LD4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
TRIM47Q96LD4 LINC02228-204ENST00000642115 2962 ntBASIC17.46■□□□□ 0.38
TRIM47Q96LD4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TRIM47Q96LD4 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TRIM47Q96LD4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 AL353770.1-201ENST00000614915 403 ntBASIC17.45■□□□□ 0.38
TRIM47Q96LD4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 HLA-C-210ENST00000640219 976 ntBASIC17.45■□□□□ 0.38
TRIM47Q96LD4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.45■□□□□ 0.38
TRIM47Q96LD4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.44■□□□□ 0.38
TRIM47Q96LD4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 AL645937.2-201ENST00000396808 931 ntBASIC17.44■□□□□ 0.38
TRIM47Q96LD4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 AC011491.1-203ENST00000637688 543 ntBASIC17.44■□□□□ 0.38
TRIM47Q96LD4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM47Q96LD4 TCAF2P1-201ENST00000291129 2421 ntBASIC17.43■□□□□ 0.38
TRIM47Q96LD4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 AL136309.1-201ENST00000403917 691 ntBASIC17.43■□□□□ 0.38
TRIM47Q96LD4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 CEP164P1-201ENST00000455142 418 ntBASIC17.43■□□□□ 0.38
TRIM47Q96LD4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM47Q96LD4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms