Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DDX11Q96FC9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 PFN1P12-201ENST00000455938 534 ntBASIC17.78■□□□□ 0.44
DDX11Q96FC9 KRT18P25-201ENST00000508931 1278 ntBASIC17.78■□□□□ 0.44
DDX11Q96FC9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.78■□□□□ 0.44
DDX11Q96FC9 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DDX11Q96FC9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.78■□□□□ 0.44
DDX11Q96FC9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 GNRHR2-203ENST00000581100 1187 ntBASIC17.77■□□□□ 0.44
DDX11Q96FC9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 AP005019.2-201ENST00000615104 511 ntBASIC17.77■□□□□ 0.44
DDX11Q96FC9 MIR6787-201ENST00000616675 61 ntBASIC17.77■□□□□ 0.44
DDX11Q96FC9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX11Q96FC9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX11Q96FC9 AL137783.1-201ENST00000623494 1896 ntBASIC17.77■□□□□ 0.43
DDX11Q96FC9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.77■□□□□ 0.43
DDX11Q96FC9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
DDX11Q96FC9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX11Q96FC9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX11Q96FC9 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX11Q96FC9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
DDX11Q96FC9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX11Q96FC9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX11Q96FC9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX11Q96FC9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 AC018442.1-201ENST00000421439 2061 ntBASIC17.76■□□□□ 0.43
DDX11Q96FC9 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.76■□□□□ 0.43
DDX11Q96FC9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 HLA-K-203ENST00000430151 1046 ntBASIC17.76■□□□□ 0.43
DDX11Q96FC9 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 AC023310.1-201ENST00000554836 735 ntBASIC17.76■□□□□ 0.43
DDX11Q96FC9 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX11Q96FC9 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
DDX11Q96FC9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms