Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PGBD4Q96DM1 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AC023090.2-201ENST00000625182 2110 ntBASIC16.13■□□□□ 0.17
PGBD4Q96DM1 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AL645939.5-201ENST00000606834 243 ntBASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AC026740.1-201ENST00000607068 791 ntBASIC16.13■□□□□ 0.17
PGBD4Q96DM1 BX088702.1-201ENST00000610784 235 ntBASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AC090164.2-201ENST00000611487 516 ntBASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.13■□□□□ 0.17
PGBD4Q96DM1 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 REXO1L2P-201ENST00000425429 2069 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 UPF3AP2-201ENST00000457924 1132 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RN7SL11P-201ENST00000471305 293 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RPL18P13-201ENST00000478088 569 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 MARK2P5-201ENST00000507649 634 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 RN7SL774P-201ENST00000577467 290 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC009884.2-201ENST00000603110 324 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AP001505.2-201ENST00000616815 443 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
PGBD4Q96DM1 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 AL805961.1-203ENST00000641078 1258 ntBASIC16.12■□□□□ 0.17
PGBD4Q96DM1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms