Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.85■□□□□ 0.13
DDX1Q92499 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
DDX1Q92499 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.85■□□□□ 0.13
DDX1Q92499 AP003171.2-201ENST00000528208 925 ntBASIC15.85■□□□□ 0.13
DDX1Q92499 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.85■□□□□ 0.13
DDX1Q92499 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.85■□□□□ 0.13
DDX1Q92499 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.85■□□□□ 0.13
DDX1Q92499 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.85■□□□□ 0.13
DDX1Q92499 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 AL136172.1-201ENST00000598590 1394 ntBASIC15.85■□□□□ 0.13
DDX1Q92499 AC009093.2-202ENST00000620513 2079 ntBASIC15.85■□□□□ 0.13
DDX1Q92499 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 AP000593.2-201ENST00000542775 1433 ntBASIC15.85■□□□□ 0.13
DDX1Q92499 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.84■□□□□ 0.13
DDX1Q92499 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
DDX1Q92499 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
DDX1Q92499 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.84■□□□□ 0.13
DDX1Q92499 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 RPL7P3-201ENST00000441388 714 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 MYADML-201ENST00000474610 2147 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.84■□□□□ 0.13
DDX1Q92499 FTLP10-202ENST00000505798 471 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.84■□□□□ 0.13
DDX1Q92499 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.84■□□□□ 0.13
DDX1Q92499 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.84■□□□□ 0.13
DDX1Q92499 AC010328.2-201ENST00000597698 1111 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 BX088702.1-201ENST00000610784 235 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 FKBP4P6-201ENST00000457486 1332 ntBASIC15.84■□□□□ 0.13
DDX1Q92499 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.84■□□□□ 0.13
DDX1Q92499 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
DDX1Q92499 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.83■□□□□ 0.13
DDX1Q92499 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
DDX1Q92499 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
DDX1Q92499 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DDX1Q92499 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.83■□□□□ 0.13
DDX1Q92499 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
DDX1Q92499 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DDX1Q92499 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
DDX1Q92499 AC015656.1-201ENST00000624209 3578 ntBASIC15.83■□□□□ 0.12
DDX1Q92499 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.83■□□□□ 0.12
DDX1Q92499 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.83■□□□□ 0.12
DDX1Q92499 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.83■□□□□ 0.12
DDX1Q92499 BCRP2-202ENST00000447763 634 ntBASIC15.83■□□□□ 0.12
DDX1Q92499 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.83■□□□□ 0.12
DDX1Q92499 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.83■□□□□ 0.12
DDX1Q92499 BCRP6-201ENST00000510112 632 ntBASIC15.83■□□□□ 0.12
DDX1Q92499 BCRP7-201ENST00000511549 544 ntBASIC15.83■□□□□ 0.12
DDX1Q92499 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 AC106820.3-201ENST00000561653 397 ntBASIC15.83■□□□□ 0.12
DDX1Q92499 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.83■□□□□ 0.12
DDX1Q92499 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
DDX1Q92499 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms