Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 MX1-218ENST00000619682 1980 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 AC018629.1-201ENST00000623381 1736 ntBASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 CAP2P1-201ENST00000557743 1390 ntBASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCNB3Q8WWL7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 AC026803.1-201ENST00000569130 274 ntBASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 WDR7-208ENST00000589935 544 ntTSL 4 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 CICP14-201ENST00000629111 2732 ntBASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CCNB3Q8WWL7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 TMBIM7P-202ENST00000641474 1516 ntBASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 FRMPD2B-201ENST00000431305 1347 ntBASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCNB3Q8WWL7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 XBP1P1-201ENST00000436573 652 ntBASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AC098935.1-201ENST00000446057 611 ntBASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AC104784.1-201ENST00000473096 294 ntBASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 NPM1P43-201ENST00000558669 786 ntBASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AL805961.1-201ENST00000642026 753 ntBASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 LINC01165-201ENST00000445190 1623 ntBASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 PFN2-206ENST00000461930 606 ntTSL 4 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCNB3Q8WWL7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 CICP24-201ENST00000605464 2705 ntBASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCNB3Q8WWL7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms