Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 BCRP6-201ENST00000510112 632 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 BCRP7-201ENST00000511549 544 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AP001889.1-201ENST00000525414 633 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AP001582.1-201ENST00000525856 295 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 DUX4L47-201ENST00000566374 394 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AL021368.1-201ENST00000607490 540 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC016597.2-201ENST00000613256 341 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC097655.1-201ENST00000635075 318 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SNX18-202ENST00000343017 3140 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC007191.1-201ENST00000623179 2995 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 MIR600HG-201ENST00000449175 5984 ntBASIC15.26■□□□□ 0.03
PTCD2Q8WV60 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PTCD2Q8WV60 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC244107.1-201ENST00000442033 332 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC022210.1-201ENST00000449856 793 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC106760.1-201ENST00000508690 800 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC106886.1-201ENST00000568660 600 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC015936.2-201ENST00000593177 259 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC233724.13-201ENST00000598383 410 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 MIR6775-201ENST00000617557 69 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AC002044.3-201ENST00000623314 541 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 AL022393.1-201ENST00000625142 1677 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 MTHFR-210ENST00000641407 2387 ntBASIC15.25■□□□□ 0.03
PTCD2Q8WV60 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTCD2Q8WV60 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTCD2Q8WV60 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms