Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.01□□□□□ -0.33
CCDC107Q8WV48 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CCDC107Q8WV48 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCDC107Q8WV48 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 AP000845.1-201ENST00000581677 2131 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13□□□□□ -0.33
CCDC107Q8WV48 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13□□□□□ -0.33
CCDC107Q8WV48 AC092053.3-201ENST00000641308 4975 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CCDC107Q8WV48 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 KRT18P13-201ENST00000400056 1290 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 AL080243.2-201ENST00000418783 582 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 AP006288.1-201ENST00000446065 395 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 SLED1-202ENST00000512051 380 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13□□□□□ -0.33
CCDC107Q8WV48 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13□□□□□ -0.33
CCDC107Q8WV48 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13□□□□□ -0.33
CCDC107Q8WV48 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13□□□□□ -0.33
CCDC107Q8WV48 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13□□□□□ -0.33
CCDC107Q8WV48 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13□□□□□ -0.33
CCDC107Q8WV48 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13□□□□□ -0.33
CCDC107Q8WV48 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13□□□□□ -0.33
CCDC107Q8WV48 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CCDC107Q8WV48 CSPG4P11-201ENST00000560634 4910 ntBASIC13□□□□□ -0.33
CCDC107Q8WV48 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CCDC107Q8WV48 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CCDC107Q8WV48 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms