Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ITGA4-203ENST00000397033 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 INPP5K-203ENST00000406424 3194 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CTSE-202ENST00000360218 2071 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CENPL-201ENST00000345664 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 STRADA-201ENST00000245865 2959 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ZRANB2-AS2-202ENST00000413421 826 ntTSL 3 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC092638.2-201ENST00000441105 947 ntBASIC8.97□□□□□ -0.97
SVIPQ8NHG7 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 NT5C1B-RDH14-202ENST00000532967 2142 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC108673.2-201ENST00000608909 565 ntBASIC8.97□□□□□ -0.97
SVIPQ8NHG7 EHMT1-240ENST00000637318 2983 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC036111.1-201ENST00000533973 1582 ntBASIC8.97□□□□□ -0.97
SVIPQ8NHG7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 POTEH-203ENST00000621704 1874 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 RBFOX1-203ENST00000355637 3321 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ADAMTS20-204ENST00000553158 4633 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CBLB-201ENST00000264122 6780 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 TCHP-201ENST00000312777 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ADAM32-203ENST00000437682 2281 ntTSL 2 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 MYH4-201ENST00000255381 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 CBFA2T2-205ENST00000375279 7617 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC8.97□□□□□ -0.97
SVIPQ8NHG7 AC026336.3-201ENST00000611525 2076 ntBASIC8.96□□□□□ -0.97
SVIPQ8NHG7 TRIM32-201ENST00000373983 3688 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 SCAMP5-203ENST00000562212 3400 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 LILRB1-201ENST00000324602 2774 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 PAMR1-209ENST00000622144 2785 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 CPT1A-201ENST00000265641 5232 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 ACVR1-207ENST00000434821 2861 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 AC098850.5-201ENST00000602730 3243 ntTSL 5 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 IRF1-201ENST00000245414 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 PTCD2-211ENST00000536805 1911 ntTSL 2 BASIC8.96□□□□□ -0.97
SVIPQ8NHG7 INTS4P1-203ENST00000641008 3683 ntBASIC8.96□□□□□ -0.97
SVIPQ8NHG7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 COA5-202ENST00000409997 557 ntTSL 4 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CD37-203ENST00000426897 1204 ntTSL 2 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 BMS1P16-201ENST00000556075 1147 ntBASIC8.96□□□□□ -0.98
SVIPQ8NHG7 AC005498.2-205ENST00000593218 784 ntBASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CBR3-AS1-208ENST00000608690 590 ntTSL 5 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 INAVA-201ENST00000367342 4298 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CMTR1-201ENST00000373451 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CENPO-201ENST00000260662 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 CREB3L4-201ENST00000271889 1750 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 ATG13-207ENST00000526508 4199 ntTSL 5 BASIC8.96□□□□□ -0.98
SVIPQ8NHG7 AL590822.2-201ENST00000606533 4196 ntBASIC8.96□□□□□ -0.98
SVIPQ8NHG7 ARHGAP44-201ENST00000262444 3001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms