Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 AL136172.1-201ENST00000598590 1394 ntBASIC16.01■□□□□ 0.15
BEST2Q8NFU1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 AC144831.1-201ENST00000573312 2656 ntBASIC16.01■□□□□ 0.15
BEST2Q8NFU1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.01■□□□□ 0.15
BEST2Q8NFU1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 AC004898.1-201ENST00000451057 766 ntBASIC16.01■□□□□ 0.15
BEST2Q8NFU1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 OR2I1P-209ENST00000641730 5365 ntBASIC16.01■□□□□ 0.15
BEST2Q8NFU1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.01■□□□□ 0.15
BEST2Q8NFU1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 MRPL37P1-201ENST00000592451 1337 ntBASIC16■□□□□ 0.15
BEST2Q8NFU1 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 AC018442.1-201ENST00000421439 2061 ntBASIC16■□□□□ 0.15
BEST2Q8NFU1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 AGER-203ENST00000375065 665 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16■□□□□ 0.15
BEST2Q8NFU1 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16■□□□□ 0.15
BEST2Q8NFU1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 PUDPP3-201ENST00000445368 636 ntBASIC16■□□□□ 0.15
BEST2Q8NFU1 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16■□□□□ 0.15
BEST2Q8NFU1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16■□□□□ 0.15
BEST2Q8NFU1 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16■□□□□ 0.15
BEST2Q8NFU1 DUX4L46-201ENST00000566845 751 ntBASIC16■□□□□ 0.15
BEST2Q8NFU1 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 AC007663.3-201ENST00000609632 465 ntBASIC16■□□□□ 0.15
BEST2Q8NFU1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16■□□□□ 0.15
BEST2Q8NFU1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16■□□□□ 0.15
BEST2Q8NFU1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
BEST2Q8NFU1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
BEST2Q8NFU1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16■□□□□ 0.15
BEST2Q8NFU1 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AC092135.3-201ENST00000624151 1846 ntBASIC15.99■□□□□ 0.15
BEST2Q8NFU1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AC021723.1-201ENST00000486306 515 ntBASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.99■□□□□ 0.15
BEST2Q8NFU1 AC100827.2-201ENST00000563214 1194 ntBASIC15.99■□□□□ 0.15
BEST2Q8NFU1 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms