Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
NUP35Q8NFH5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 AGAP10P-201ENST00000454844 2418 ntBASIC11.19□□□□□ -0.62
NUP35Q8NFH5 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 AC018712.1-201ENST00000455767 687 ntBASIC11.19□□□□□ -0.62
NUP35Q8NFH5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 AC004877.2-201ENST00000623941 599 ntBASIC11.19□□□□□ -0.62
NUP35Q8NFH5 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
NUP35Q8NFH5 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
NUP35Q8NFH5 AL023775.1-201ENST00000454907 1746 ntBASIC11.18□□□□□ -0.62
NUP35Q8NFH5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms