Protein–RNA interactions for Protein: Q8NE01

CNNM3, Metal transporter CNNM3, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3Q8NE01 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNNM3Q8NE01 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 ST20-AS1-201ENST00000560255 4223 ntBASIC17.08■□□□□ 0.32
CNNM3Q8NE01 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 AL645937.2-201ENST00000396808 931 ntBASIC17.08■□□□□ 0.32
CNNM3Q8NE01 AC079776.1-201ENST00000401540 1152 ntBASIC17.08■□□□□ 0.32
CNNM3Q8NE01 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 AC112492.5-201ENST00000421897 457 ntBASIC17.08■□□□□ 0.32
CNNM3Q8NE01 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 HILS1-202ENST00000545329 423 ntBASIC17.08■□□□□ 0.32
CNNM3Q8NE01 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 INTS4P2-202ENST00000614726 2019 ntBASIC17.08■□□□□ 0.32
CNNM3Q8NE01 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
CNNM3Q8NE01 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 BOLA2P3-201ENST00000404566 256 ntBASIC17.07■□□□□ 0.32
CNNM3Q8NE01 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 SOCS2P1-201ENST00000417727 557 ntBASIC17.07■□□□□ 0.32
CNNM3Q8NE01 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 ACTG1P3-201ENST00000431775 1114 ntBASIC17.07■□□□□ 0.32
CNNM3Q8NE01 VDAC1P7-201ENST00000462417 847 ntBASIC17.07■□□□□ 0.32
CNNM3Q8NE01 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 AL359711.2-201ENST00000563105 872 ntBASIC17.07■□□□□ 0.32
CNNM3Q8NE01 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CNNM3Q8NE01 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CNNM3Q8NE01 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms