Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CFAP43Q8NDM7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 RN7SL277P-201ENST00000481521 288 ntBASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 AC124068.2-201ENST00000569473 1109 ntBASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 AC055811.3-201ENST00000584952 686 ntBASIC22.65■■□□□ 1.22
CFAP43Q8NDM7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CFAP43Q8NDM7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 UROS-201ENST00000368774 744 ntTSL 2 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 ERP29P1-201ENST00000442902 706 ntBASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CFAP43Q8NDM7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 AL357373.1-201ENST00000394974 322 ntBASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 TPT1P11-201ENST00000458482 498 ntBASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 AC140113.1-201ENST00000603467 169 ntBASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 HMGB1P24-201ENST00000611897 328 ntBASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 AC090386.2-201ENST00000623010 1039 ntBASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 AC064801.2-201ENST00000625052 1303 ntBASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
CFAP43Q8NDM7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC22.62■■□□□ 1.21
CFAP43Q8NDM7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms