Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 SBF1P1-201ENST00000444527 5631 ntBASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 AL645937.2-201ENST00000396808 931 ntBASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 AL096828.3-201ENST00000615354 462 ntBASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC155Q8N6L0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
CCDC155Q8N6L0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 AC013726.1-201ENST00000563747 2285 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 ELK2AP-201ENST00000392510 1007 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 MIR663B-201ENST00000408361 115 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 BX284668.4-201ENST00000453917 508 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 AC004066.1-201ENST00000502488 802 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 AC025181.2-201ENST00000606994 802 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 AL021578.1-201ENST00000613646 709 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 ENPP7P14-201ENST00000621765 1040 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 AJ011931.1-201ENST00000618749 2492 ntBASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCDC155Q8N6L0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CCDC155Q8N6L0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms