Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.12■□□□□ 0.01
SYNPOQ8N3V7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AL157414.3-201ENST00000624276 1954 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 TBC1D3J-201ENST00000620719 1426 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 RN7SKP230-201ENST00000365642 335 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 TLE1P1-201ENST00000422965 589 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AC078875.1-201ENST00000431907 724 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 PGAM1P5-201ENST00000548011 764 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AC103810.10-201ENST00000606504 343 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AC244394.1-201ENST00000435000 1665 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 INE2-201ENST00000630399 1874 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 AC009093.2-202ENST00000620513 2079 ntBASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SYNPOQ8N3V7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 AC105250.1-201ENST00000509378 2057 ntBASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.1■□□□□ 0.01
SYNPOQ8N3V7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms