Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.25■□□□□ 0.19
VPS52Q8N1B4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 KRT8P4-201ENST00000509735 1454 ntBASIC16.24■□□□□ 0.19
VPS52Q8N1B4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.24■□□□□ 0.19
VPS52Q8N1B4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 AL391280.1-201ENST00000506969 1062 ntBASIC16.24■□□□□ 0.19
VPS52Q8N1B4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 AC073413.1-201ENST00000603927 732 ntBASIC16.24■□□□□ 0.19
VPS52Q8N1B4 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
VPS52Q8N1B4 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 ELK2AP-201ENST00000392510 1007 ntBASIC16.23■□□□□ 0.19
VPS52Q8N1B4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 NDUFV2P1-201ENST00000596415 907 ntBASIC16.23■□□□□ 0.19
VPS52Q8N1B4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 ZACNP1-201ENST00000612259 710 ntBASIC16.23■□□□□ 0.19
VPS52Q8N1B4 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AL645728.2-202ENST00000641679 227 ntBASIC16.23■□□□□ 0.19
VPS52Q8N1B4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
VPS52Q8N1B4 AC009090.5-201ENST00000624886 2285 ntBASIC16.22■□□□□ 0.19
VPS52Q8N1B4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.22■□□□□ 0.19
VPS52Q8N1B4 NKAIN1P1-201ENST00000435754 582 ntBASIC16.22■□□□□ 0.19
VPS52Q8N1B4 EIF4HP1-201ENST00000453115 687 ntBASIC16.22■□□□□ 0.19
VPS52Q8N1B4 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms