Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC008894.3-201ENST00000624324 3103 ntBASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC006486.2-201ENST00000624246 2199 ntBASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 AC104506.1-201ENST00000609247 429 ntBASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
COL27A1Q8IZC6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COL27A1Q8IZC6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
COL27A1Q8IZC6 CTBP2P8-201ENST00000422584 1330 ntBASIC13.58□□□□□ -0.23
COL27A1Q8IZC6 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.58□□□□□ -0.23
COL27A1Q8IZC6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
COL27A1Q8IZC6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
COL27A1Q8IZC6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 RNVU1-8-201ENST00000364272 125 ntBASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 AC006987.1-201ENST00000413610 527 ntBASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 AC244197.1-201ENST00000456494 951 ntBASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 MT2A-202ENST00000561491 581 ntTSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 EIF5AP2-201ENST00000585668 1047 ntBASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 LINC00244-201ENST00000625073 613 ntBASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 MSANTD2P1-201ENST00000445341 1368 ntBASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
COL27A1Q8IZC6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 AC025186.1-201ENST00000478174 870 ntBASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 RN7SL23P-201ENST00000484055 275 ntBASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 CHCHD2P2-201ENST00000503744 321 ntBASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 RNA5SP406-201ENST00000516106 112 ntBASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COL27A1Q8IZC6 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms