Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC83Q8IWF9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AC003102.2-201ENST00000589195 1469 ntBASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ST20-AS1-201ENST00000560255 4223 ntBASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AC008494.3-201ENST00000606615 944 ntBASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AP005019.2-201ENST00000615104 511 ntBASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 AJ011932.1-201ENST00000621707 465 ntBASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC83Q8IWF9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AL391825.1-201ENST00000457671 1364 ntBASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 ACTBP8-201ENST00000403258 1108 ntBASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AC092135.3-201ENST00000624151 1846 ntBASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC83Q8IWF9 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC83Q8IWF9 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms