Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 TMPOP1-202ENST00000424642 1267 ntBASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AC097359.3-201ENST00000603982 1210 ntBASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AC012531.1-201ENST00000562848 2680 ntBASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AC015819.3-201ENST00000624305 2674 ntBASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CROCCP3Q8IVE0 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 FAM90A11P-201ENST00000518378 2218 ntBASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AC136604.1-202ENST00000425471 771 ntBASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 RPS2P1-201ENST00000434010 821 ntBASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AC140658.5-201ENST00000438532 169 ntBASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 AC073389.1-201ENST00000595595 795 ntBASIC13.56□□□□□ -0.24
CROCCP3Q8IVE0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms