Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.82■□□□□ 0.12
NPAS4Q8IUM7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 AP001065.2-201ENST00000617205 644 ntBASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 AC092135.3-201ENST00000624151 1846 ntBASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NPAS4Q8IUM7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 KRT8P31-201ENST00000504812 1408 ntBASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 AL807761.2-201ENST00000422849 729 ntBASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 RN7SL818P-201ENST00000485099 259 ntBASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 NDUFS6P1-201ENST00000485187 316 ntBASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 AC007326.1-201ENST00000604539 458 ntBASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 RN7SL725P-201ENST00000606439 259 ntBASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NPAS4Q8IUM7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NPAS4Q8IUM7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms