Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TPM3P8-201ENST00000330554 643 ntBASIC14.36□□□□□ -0.11
RAB43Q86YS6 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 Z93015.1-201ENST00000451718 390 ntBASIC14.36□□□□□ -0.11
RAB43Q86YS6 AC108725.1-201ENST00000495472 409 ntBASIC14.36□□□□□ -0.11
RAB43Q86YS6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 AC243960.2-201ENST00000600996 747 ntBASIC14.36□□□□□ -0.11
RAB43Q86YS6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.36□□□□□ -0.11
RAB43Q86YS6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAB43Q86YS6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAB43Q86YS6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 CD8B2-202ENST00000417670 633 ntBASIC14.35□□□□□ -0.11
RAB43Q86YS6 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 RN7SL48P-201ENST00000579283 293 ntBASIC14.35□□□□□ -0.11
RAB43Q86YS6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB43Q86YS6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB43Q86YS6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB43Q86YS6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB43Q86YS6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB43Q86YS6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 AC041040.2-201ENST00000622926 2899 ntBASIC14.34□□□□□ -0.11
RAB43Q86YS6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB43Q86YS6 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms