Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC152010.1-201ENST00000415779 2006 ntBASIC13.84□□□□□ -0.19
VRK2Q86Y07 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VRK2Q86Y07 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
VRK2Q86Y07 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
VRK2Q86Y07 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VRK2Q86Y07 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VRK2Q86Y07 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
VRK2Q86Y07 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.83□□□□□ -0.19
VRK2Q86Y07 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VRK2Q86Y07 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
VRK2Q86Y07 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
VRK2Q86Y07 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
VRK2Q86Y07 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
VRK2Q86Y07 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ACTBP8-201ENST00000403258 1108 ntBASIC13.83□□□□□ -0.2
VRK2Q86Y07 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ENPP7P5-201ENST00000541031 1031 ntBASIC13.83□□□□□ -0.2
VRK2Q86Y07 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 SPCS2P1-201ENST00000561636 679 ntBASIC13.83□□□□□ -0.2
VRK2Q86Y07 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AL096865.1-201ENST00000606796 927 ntBASIC13.83□□□□□ -0.2
VRK2Q86Y07 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.83□□□□□ -0.2
VRK2Q86Y07 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.83□□□□□ -0.2
VRK2Q86Y07 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VRK2Q86Y07 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VRK2Q86Y07 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VRK2Q86Y07 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
VRK2Q86Y07 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VRK2Q86Y07 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms