Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC10.1□□□□□ -0.79
CSMD3Q7Z407 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 OR10N1P-201ENST00000392758 869 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 RGS5-216ENST00000449680 788 ntTSL 3 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 BPIFB5P-201ENST00000457066 1099 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 RN7SL564P-201ENST00000496309 250 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 TRMT112P3-201ENST00000580149 358 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC139749.1-202ENST00000617529 3139 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC046158.3-201ENST00000624947 2558 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC008972.2-201ENST00000606587 494 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 BANP-204ENST00000393208 2283 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 SOD2-205ENST00000444946 917 ntTSL 2 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 RPS18P9-201ENST00000482817 460 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 AC124068.2-201ENST00000569473 1109 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 WASH3P-207ENST00000560956 1394 ntBASIC10.09□□□□□ -0.79
CSMD3Q7Z407 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
CSMD3Q7Z407 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 NQO2-204ENST00000380454 851 ntTSL 2 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 MIR1301-201ENST00000408518 82 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 AC006116.2-201ENST00000589958 988 ntBASIC10.08□□□□□ -0.8
CSMD3Q7Z407 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
CSMD3Q7Z407 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms