Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 TSEN15P1-201ENST00000423257 515 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC067863.1-201ENST00000494933 530 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC004066.1-201ENST00000502488 802 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC109322.1-201ENST00000524499 1264 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC027369.6-201ENST00000525520 931 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 ZNF890P-202ENST00000530367 1156 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC004449.1-201ENST00000564240 433 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC140878.1-201ENST00000565277 250 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AL596442.2-201ENST00000610240 980 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 Z92544.3-201ENST00000624747 417 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC004461.2-201ENST00000629517 803 ntBASIC13.57□□□□□ -0.24
SHFQ7M4L6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SHFQ7M4L6 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SHFQ7M4L6 AC131212.3-201ENST00000624087 4219 ntBASIC13.56□□□□□ -0.24
SHFQ7M4L6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 AL359881.3-201ENST00000602640 1721 ntBASIC13.56□□□□□ -0.24
SHFQ7M4L6 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 KLF2P3-201ENST00000451977 1087 ntBASIC13.56□□□□□ -0.24
SHFQ7M4L6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 AC015911.4-201ENST00000588022 1070 ntBASIC13.56□□□□□ -0.24
SHFQ7M4L6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.56□□□□□ -0.24
SHFQ7M4L6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.56□□□□□ -0.24
SHFQ7M4L6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SHFQ7M4L6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.56□□□□□ -0.24
SHFQ7M4L6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms