Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC12.06□□□□□ -0.48
VPS13CQ709C8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
VPS13CQ709C8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.06□□□□□ -0.48
VPS13CQ709C8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13CQ709C8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13CQ709C8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13CQ709C8 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.06□□□□□ -0.48
VPS13CQ709C8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
VPS13CQ709C8 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC012508.2-201ENST00000567613 1472 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 MIR645-201ENST00000385283 94 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC108724.1-201ENST00000481669 352 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 MIR5001-201ENST00000580185 100 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC006116.2-201ENST00000589958 988 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC019109.1-201ENST00000401725 1874 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC007950.2-201ENST00000615045 2347 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 RN7SL564P-201ENST00000496309 250 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC105917.1-201ENST00000506637 2539 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 ACE3P-201ENST00000423435 1973 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 AC021305.1-201ENST00000520656 1514 ntBASIC12.05□□□□□ -0.48
VPS13CQ709C8 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
VPS13CQ709C8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.05□□□□□ -0.48
VPS13CQ709C8 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 RPL18AP8-201ENST00000486071 528 ntBASIC12.04□□□□□ -0.48
VPS13CQ709C8 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC021016.3-201ENST00000608367 477 ntBASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC011462.4-201ENST00000616866 449 ntBASIC12.04□□□□□ -0.48
VPS13CQ709C8 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 AC092570.1-201ENST00000414446 469 ntBASIC12.04□□□□□ -0.48
VPS13CQ709C8 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
VPS13CQ709C8 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.04□□□□□ -0.48
VPS13CQ709C8 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms