Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 RNA5SP421-201ENST00000516864 134 ntBASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC097359.3-201ENST00000603982 1210 ntBASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC074044.1-201ENST00000609673 707 ntBASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM53Q6P2H8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AL607033.1-201ENST00000623900 1599 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 TARDBPP1-201ENST00000442013 1203 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC027796.2-201ENST00000575326 344 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC025048.3-201ENST00000590609 569 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AC005702.4-201ENST00000618393 416 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 DMBT1P1-203ENST00000636837 4628 ntBASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM53Q6P2H8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms