Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 TLE1P1-201ENST00000422965 589 ntBASIC13.95□□□□□ -0.18
REEP3Q6NUK4 AL442647.2-201ENST00000429864 857 ntBASIC13.95□□□□□ -0.18
REEP3Q6NUK4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 AC007969.1-201ENST00000433675 447 ntBASIC13.95□□□□□ -0.18
REEP3Q6NUK4 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 GIMAP3P-201ENST00000495150 836 ntBASIC13.95□□□□□ -0.18
REEP3Q6NUK4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 AC055876.2-201ENST00000531834 546 ntBASIC13.95□□□□□ -0.18
REEP3Q6NUK4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 SALL4P5-201ENST00000419001 1760 ntBASIC13.95□□□□□ -0.18
REEP3Q6NUK4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
REEP3Q6NUK4 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 KLF2P2-201ENST00000416807 1039 ntBASIC13.94□□□□□ -0.18
REEP3Q6NUK4 SOCS2P1-201ENST00000417727 557 ntBASIC13.94□□□□□ -0.18
REEP3Q6NUK4 GNAQP1-201ENST00000444815 1067 ntBASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AC092364.2-202ENST00000597012 1073 ntBASIC13.94□□□□□ -0.18
REEP3Q6NUK4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 SLC7A15P-201ENST00000424028 1363 ntBASIC13.94□□□□□ -0.18
REEP3Q6NUK4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.94□□□□□ -0.18
REEP3Q6NUK4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.93□□□□□ -0.18
REEP3Q6NUK4 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms