Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AL138725.1-201ENST00000407347 1314 ntBASIC17.84■□□□□ 0.45
RNF20Q5VTR2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AC015936.2-201ENST00000593177 259 ntBASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AL358472.5-202ENST00000641448 1267 ntBASIC17.84■□□□□ 0.45
RNF20Q5VTR2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 AC092135.3-201ENST00000624151 1846 ntBASIC17.84■□□□□ 0.45
RNF20Q5VTR2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
RNF20Q5VTR2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RNF20Q5VTR2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 RN7SL837P-201ENST00000463010 287 ntBASIC17.83■□□□□ 0.44
RNF20Q5VTR2 MESTP3-201ENST00000503460 968 ntBASIC17.83■□□□□ 0.44
RNF20Q5VTR2 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 AL138709.1-201ENST00000614840 1693 ntBASIC17.83■□□□□ 0.44
RNF20Q5VTR2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.83■□□□□ 0.44
RNF20Q5VTR2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 AC005229.1-201ENST00000392885 409 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 POM121L8P-201ENST00000417732 1281 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 POM121L9P-203ENST00000441984 1285 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 RN7SL692P-201ENST00000464677 288 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.82■□□□□ 0.44
RNF20Q5VTR2 AP001889.1-201ENST00000525414 633 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 AC131206.1-201ENST00000538078 1211 ntBASIC17.82■□□□□ 0.44
RNF20Q5VTR2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms