Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CD47Q08722 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 INE2-201ENST00000630399 1874 ntBASIC13.94□□□□□ -0.18
CD47Q08722 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
CD47Q08722 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.94□□□□□ -0.18
CD47Q08722 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CD47Q08722 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.93□□□□□ -0.18
CD47Q08722 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 AC090505.1-201ENST00000430515 1834 ntBASIC13.93□□□□□ -0.18
CD47Q08722 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.93□□□□□ -0.18
CD47Q08722 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.93□□□□□ -0.18
CD47Q08722 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.93□□□□□ -0.18
CD47Q08722 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.93□□□□□ -0.18
CD47Q08722 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.93□□□□□ -0.18
CD47Q08722 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.93□□□□□ -0.18
CD47Q08722 AC025048.3-201ENST00000590609 569 ntBASIC13.93□□□□□ -0.18
CD47Q08722 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 AC005702.4-201ENST00000618393 416 ntBASIC13.93□□□□□ -0.18
CD47Q08722 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.93□□□□□ -0.18
CD47Q08722 AL645728.2-202ENST00000641679 227 ntBASIC13.93□□□□□ -0.18
CD47Q08722 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD47Q08722 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
CD47Q08722 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD47Q08722 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.93□□□□□ -0.18
CD47Q08722 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CD47Q08722 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.93□□□□□ -0.18
CD47Q08722 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CD47Q08722 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CD47Q08722 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
CD47Q08722 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.92□□□□□ -0.18
CD47Q08722 METTL21AP1-201ENST00000438852 635 ntBASIC13.92□□□□□ -0.18
CD47Q08722 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.92□□□□□ -0.18
CD47Q08722 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.92□□□□□ -0.18
CD47Q08722 IGHV3-42-201ENST00000520410 361 ntBASIC13.92□□□□□ -0.18
CD47Q08722 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CD47Q08722 AL512361.1-201ENST00000554200 418 ntBASIC13.92□□□□□ -0.18
CD47Q08722 AC015910.1-201ENST00000579400 975 ntBASIC13.92□□□□□ -0.18
CD47Q08722 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms