Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LTBQ06643 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 BRWD1P1-201ENST00000401091 371 ntBASIC13.68□□□□□ -0.22
LTBQ06643 BOLA2P3-201ENST00000404566 256 ntBASIC13.68□□□□□ -0.22
LTBQ06643 AL139094.1-201ENST00000405549 1188 ntBASIC13.68□□□□□ -0.22
LTBQ06643 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.68□□□□□ -0.22
LTBQ06643 NUS1P3-201ENST00000423502 862 ntBASIC13.68□□□□□ -0.22
LTBQ06643 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.68□□□□□ -0.22
LTBQ06643 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 CTBP2P3-201ENST00000585629 1255 ntBASIC13.68□□□□□ -0.22
LTBQ06643 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.68□□□□□ -0.22
LTBQ06643 AC244093.1-201ENST00000610837 814 ntBASIC13.68□□□□□ -0.22
LTBQ06643 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.68□□□□□ -0.22
LTBQ06643 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.68□□□□□ -0.22
LTBQ06643 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTBQ06643 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.67□□□□□ -0.22
LTBQ06643 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 ST20-AS1-201ENST00000560255 4223 ntBASIC13.67□□□□□ -0.22
LTBQ06643 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 RNU1-114P-201ENST00000365297 166 ntBASIC13.67□□□□□ -0.22
LTBQ06643 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LTBQ06643 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LTBQ06643 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 TMEM14DP-201ENST00000422205 345 ntBASIC13.67□□□□□ -0.22
LTBQ06643 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
LTBQ06643 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.67□□□□□ -0.22
LTBQ06643 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.67□□□□□ -0.22
LTBQ06643 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.67□□□□□ -0.22
LTBQ06643 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.67□□□□□ -0.22
LTBQ06643 RN7SL190P-201ENST00000582519 257 ntBASIC13.67□□□□□ -0.22
LTBQ06643 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.67□□□□□ -0.22
LTBQ06643 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.67□□□□□ -0.22
LTBQ06643 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.67□□□□□ -0.22
LTBQ06643 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.67□□□□□ -0.22
LTBQ06643 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTBQ06643 CICP4-201ENST00000447359 2812 ntBASIC13.67□□□□□ -0.22
LTBQ06643 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
LTBQ06643 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LTBQ06643 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.66□□□□□ -0.22
LTBQ06643 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.66□□□□□ -0.22
LTBQ06643 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LTBQ06643 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTBQ06643 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LTBQ06643 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms