Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AC044860.1-202ENST00000559481 777 ntBASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AC012508.2-201ENST00000567613 1472 ntBASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AC087499.5-201ENST00000452760 1342 ntBASIC11.53□□□□□ -0.56
HIST1H1AQ02539 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 AP000845.1-201ENST00000581677 2131 ntBASIC11.53□□□□□ -0.56
HIST1H1AQ02539 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
HIST1H1AQ02539 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 HSPA7-201ENST00000445535 1927 ntBASIC11.52□□□□□ -0.56
HIST1H1AQ02539 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
HIST1H1AQ02539 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms