Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 AC007389.4-201ENST00000454674 793 ntBASIC14.11□□□□□ -0.15
RAE1P78406 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.11□□□□□ -0.15
RAE1P78406 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.11□□□□□ -0.15
RAE1P78406 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.11□□□□□ -0.15
RAE1P78406 SLC25A47P1-201ENST00000531577 414 ntBASIC14.11□□□□□ -0.15
RAE1P78406 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.11□□□□□ -0.15
RAE1P78406 AC106820.3-201ENST00000561653 397 ntBASIC14.11□□□□□ -0.15
RAE1P78406 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.11□□□□□ -0.15
RAE1P78406 ECM1P1-201ENST00000604092 1279 ntBASIC14.11□□□□□ -0.15
RAE1P78406 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.11□□□□□ -0.15
RAE1P78406 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 AC132938.4-201ENST00000623835 848 ntBASIC14.11□□□□□ -0.15
RAE1P78406 AC011498.7-201ENST00000624986 2027 ntBASIC14.11□□□□□ -0.15
RAE1P78406 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.11□□□□□ -0.15
RAE1P78406 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RAE1P78406 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.11□□□□□ -0.15
RAE1P78406 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.11□□□□□ -0.15
RAE1P78406 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.11□□□□□ -0.15
RAE1P78406 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAE1P78406 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RAE1P78406 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAE1P78406 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAE1P78406 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 AL590440.2-201ENST00000641973 1595 ntBASIC14.1□□□□□ -0.15
RAE1P78406 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 KHSRPP1-201ENST00000427983 1768 ntBASIC14.1□□□□□ -0.15
RAE1P78406 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.1□□□□□ -0.15
RAE1P78406 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 AL355864.2-201ENST00000447420 863 ntBASIC14.1□□□□□ -0.15
RAE1P78406 AL590640.2-201ENST00000457038 527 ntBASIC14.1□□□□□ -0.15
RAE1P78406 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.1□□□□□ -0.15
RAE1P78406 AP005018.1-201ENST00000525475 301 ntBASIC14.1□□□□□ -0.15
RAE1P78406 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RAE1P78406 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RAE1P78406 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAE1P78406 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.1□□□□□ -0.15
RAE1P78406 AC008735.3-201ENST00000596646 500 ntBASIC14.1□□□□□ -0.15
RAE1P78406 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 CICP16-201ENST00000502609 2813 ntBASIC14.1□□□□□ -0.15
RAE1P78406 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAE1P78406 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RAE1P78406 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RAE1P78406 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RAE1P78406 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.1□□□□□ -0.15
RAE1P78406 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.09□□□□□ -0.15
RAE1P78406 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RAE1P78406 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms