Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.01□□□□□ -0.33
UBA52P62987 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.01□□□□□ -0.33
UBA52P62987 AC004790.1-201ENST00000612686 536 ntBASIC13.01□□□□□ -0.33
UBA52P62987 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.01□□□□□ -0.33
UBA52P62987 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBA52P62987 SLC7A15P-201ENST00000424028 1363 ntBASIC13.01□□□□□ -0.33
UBA52P62987 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
UBA52P62987 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.01□□□□□ -0.33
UBA52P62987 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.01□□□□□ -0.33
UBA52P62987 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBA52P62987 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.01□□□□□ -0.33
UBA52P62987 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.01□□□□□ -0.33
UBA52P62987 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 MST1P2-201ENST00000457982 2291 ntBASIC13.01□□□□□ -0.33
UBA52P62987 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UBA52P62987 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UBA52P62987 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UBA52P62987 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
UBA52P62987 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
UBA52P62987 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UBA52P62987 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBA52P62987 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBA52P62987 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13□□□□□ -0.33
UBA52P62987 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13□□□□□ -0.33
UBA52P62987 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UBA52P62987 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13□□□□□ -0.33
UBA52P62987 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13□□□□□ -0.33
UBA52P62987 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBA52P62987 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UBA52P62987 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 SDHAP3-202ENST00000515467 728 ntBASIC13□□□□□ -0.33
UBA52P62987 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13□□□□□ -0.33
UBA52P62987 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
UBA52P62987 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13□□□□□ -0.33
UBA52P62987 KRT17P8-201ENST00000540749 863 ntBASIC13□□□□□ -0.33
UBA52P62987 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 RAB43P1-201ENST00000561790 589 ntBASIC13□□□□□ -0.33
UBA52P62987 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 AC106886.1-201ENST00000568660 600 ntBASIC13□□□□□ -0.33
UBA52P62987 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13□□□□□ -0.33
UBA52P62987 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13□□□□□ -0.33
UBA52P62987 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13□□□□□ -0.33
UBA52P62987 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13□□□□□ -0.33
UBA52P62987 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13□□□□□ -0.33
UBA52P62987 MIR6799-201ENST00000620297 69 ntBASIC13□□□□□ -0.33
UBA52P62987 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 AL033527.5-202ENST00000641632 1098 ntBASIC13□□□□□ -0.33
UBA52P62987 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13□□□□□ -0.33
UBA52P62987 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
UBA52P62987 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13□□□□□ -0.33
UBA52P62987 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
UBA52P62987 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13□□□□□ -0.33
UBA52P62987 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13□□□□□ -0.33
UBA52P62987 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13□□□□□ -0.33
UBA52P62987 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.99□□□□□ -0.33
UBA52P62987 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
UBA52P62987 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
UBA52P62987 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms