Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.62□□□□□ -0.71
CCL18P55774 NAA38-206ENST00000576384 424 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 COX11-210ENST00000639671 696 ntBASIC10.62□□□□□ -0.71
CCL18P55774 AL645728.2-202ENST00000641679 227 ntBASIC10.62□□□□□ -0.71
CCL18P55774 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 COCH-203ENST00000460581 2688 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 AGAP7P-201ENST00000582299 2062 ntBASIC10.62□□□□□ -0.71
CCL18P55774 AGAP14-201ENST00000624701 2060 ntBASIC10.62□□□□□ -0.71
CCL18P55774 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC10.62□□□□□ -0.71
CCL18P55774 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.62□□□□□ -0.71
CCL18P55774 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CCL18P55774 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.61□□□□□ -0.71
CCL18P55774 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 UCKL1-AS1-201ENST00000623569 3602 ntBASIC10.61□□□□□ -0.71
CCL18P55774 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.61□□□□□ -0.71
CCL18P55774 FAM21FP-201ENST00000426241 1131 ntBASIC10.61□□□□□ -0.71
CCL18P55774 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 RPS2P32-201ENST00000439199 892 ntBASIC10.61□□□□□ -0.71
CCL18P55774 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC10.61□□□□□ -0.71
CCL18P55774 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 GAPDHP40-201ENST00000505218 1006 ntBASIC10.61□□□□□ -0.71
CCL18P55774 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.61□□□□□ -0.71
CCL18P55774 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.61□□□□□ -0.71
CCL18P55774 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC10.61□□□□□ -0.71
CCL18P55774 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC10.61□□□□□ -0.71
CCL18P55774 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.61□□□□□ -0.71
CCL18P55774 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 Six3os1_5.1-201ENST00000611000 271 ntBASIC10.61□□□□□ -0.71
CCL18P55774 LARP4-220ENST00000615080 856 ntTSL 5 BASIC10.61□□□□□ -0.71
CCL18P55774 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 PDIA3P1-201ENST00000471856 1510 ntBASIC10.61□□□□□ -0.71
CCL18P55774 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.61□□□□□ -0.71
CCL18P55774 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
CCL18P55774 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CCL18P55774 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms