Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.27■□□□□ 0.19
NCKAP1LP55160 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NCKAP1LP55160 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 KHSRPP1-201ENST00000427983 1768 ntBASIC16.26■□□□□ 0.19
NCKAP1LP55160 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AL354877.1-201ENST00000424412 413 ntBASIC16.26■□□□□ 0.19
NCKAP1LP55160 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AC132192.2-201ENST00000596206 1147 ntBASIC16.26■□□□□ 0.19
NCKAP1LP55160 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 E2F3P2-201ENST00000447755 1422 ntBASIC16.26■□□□□ 0.19
NCKAP1LP55160 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NCKAP1LP55160 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.26■□□□□ 0.19
NCKAP1LP55160 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 DUX4L46-201ENST00000566845 751 ntBASIC16.25■□□□□ 0.19
NCKAP1LP55160 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 AC027601.3-201ENST00000622907 509 ntBASIC16.25■□□□□ 0.19
NCKAP1LP55160 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 AC015688.4-201ENST00000580780 1647 ntBASIC16.25■□□□□ 0.19
NCKAP1LP55160 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 AP001267.2-201ENST00000532619 2086 ntBASIC16.25■□□□□ 0.19
NCKAP1LP55160 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.25■□□□□ 0.19
NCKAP1LP55160 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NCKAP1LP55160 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NCKAP1LP55160 AC063926.3-201ENST00000624734 5658 ntBASIC16.24■□□□□ 0.19
NCKAP1LP55160 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms