Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 AC098859.1-201ENST00000502915 1238 ntBASIC14.27□□□□□ -0.13
NR1H2P55055 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.27□□□□□ -0.13
NR1H2P55055 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.27□□□□□ -0.13
NR1H2P55055 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.27□□□□□ -0.13
NR1H2P55055 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.27□□□□□ -0.13
NR1H2P55055 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NR1H2P55055 KRT8P24-201ENST00000560290 1559 ntBASIC14.26□□□□□ -0.13
NR1H2P55055 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.26□□□□□ -0.13
NR1H2P55055 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.26□□□□□ -0.13
NR1H2P55055 AC002472.2-201ENST00000442739 958 ntBASIC14.26□□□□□ -0.13
NR1H2P55055 TPT1P11-201ENST00000458482 498 ntBASIC14.26□□□□□ -0.13
NR1H2P55055 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 AC027369.6-201ENST00000525520 931 ntBASIC14.26□□□□□ -0.13
NR1H2P55055 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.26□□□□□ -0.13
NR1H2P55055 SPTSSB-204ENST00000617024 1292 ntBASIC14.26□□□□□ -0.13
NR1H2P55055 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.26□□□□□ -0.13
NR1H2P55055 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NR1H2P55055 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NR1H2P55055 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NR1H2P55055 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.26□□□□□ -0.13
NR1H2P55055 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AC020658.7-201ENST00000624274 2442 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AC073548.1-201ENST00000624088 1882 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AC073439.1-201ENST00000624121 1774 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NR1H2P55055 MIR661-201ENST00000384842 89 ntBASIC14.25□□□□□ -0.13
NR1H2P55055 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.25□□□□□ -0.13
NR1H2P55055 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.25□□□□□ -0.13
NR1H2P55055 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.25□□□□□ -0.13
NR1H2P55055 HLA-V-204ENST00000476601 1289 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms