Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.95□□□□□ -0.18
EFNA3P52797 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 GPAA1P2-201ENST00000417923 928 ntBASIC13.95□□□□□ -0.18
EFNA3P52797 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.95□□□□□ -0.18
EFNA3P52797 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.95□□□□□ -0.18
EFNA3P52797 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.95□□□□□ -0.18
EFNA3P52797 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 AC009955.4-201ENST00000597192 544 ntBASIC13.95□□□□□ -0.18
EFNA3P52797 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 AC018529.2-202ENST00000611482 3087 ntBASIC13.95□□□□□ -0.18
EFNA3P52797 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
EFNA3P52797 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.95□□□□□ -0.18
EFNA3P52797 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.95□□□□□ -0.18
EFNA3P52797 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
EFNA3P52797 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
EFNA3P52797 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
EFNA3P52797 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
EFNA3P52797 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.94□□□□□ -0.18
EFNA3P52797 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.94□□□□□ -0.18
EFNA3P52797 AC010141.1-201ENST00000411585 623 ntBASIC13.94□□□□□ -0.18
EFNA3P52797 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.94□□□□□ -0.18
EFNA3P52797 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 GCOM2-201ENST00000509133 1104 ntBASIC13.94□□□□□ -0.18
EFNA3P52797 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 MIR3615-201ENST00000581999 87 ntBASIC13.94□□□□□ -0.18
EFNA3P52797 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 AL136301.1-201ENST00000615830 422 ntBASIC13.94□□□□□ -0.18
EFNA3P52797 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
EFNA3P52797 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.94□□□□□ -0.18
EFNA3P52797 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
EFNA3P52797 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.94□□□□□ -0.18
EFNA3P52797 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.94□□□□□ -0.18
EFNA3P52797 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
EFNA3P52797 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms