Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.79■□□□□ 0.28
USP11P51784 BRWD1P1-201ENST00000401091 371 ntBASIC16.79■□□□□ 0.28
USP11P51784 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 AC007274.1-201ENST00000439805 662 ntBASIC16.79■□□□□ 0.28
USP11P51784 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.79■□□□□ 0.28
USP11P51784 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 MIR4783-201ENST00000580343 82 ntBASIC16.79■□□□□ 0.28
USP11P51784 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
USP11P51784 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.79■□□□□ 0.28
USP11P51784 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
USP11P51784 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USP11P51784 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP11P51784 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
USP11P51784 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.78■□□□□ 0.28
USP11P51784 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.78■□□□□ 0.28
USP11P51784 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.78■□□□□ 0.28
USP11P51784 FAM8A2P-201ENST00000528813 1142 ntBASIC16.78■□□□□ 0.28
USP11P51784 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.78■□□□□ 0.28
USP11P51784 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.78■□□□□ 0.28
USP11P51784 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.78■□□□□ 0.28
USP11P51784 AC132192.2-201ENST00000596206 1147 ntBASIC16.78■□□□□ 0.28
USP11P51784 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.78■□□□□ 0.28
USP11P51784 AL096828.3-201ENST00000615354 462 ntBASIC16.78■□□□□ 0.28
USP11P51784 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.78■□□□□ 0.28
USP11P51784 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
USP11P51784 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.78■□□□□ 0.28
USP11P51784 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP11P51784 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 AL009178.2-201ENST00000597278 2719 ntBASIC16.77■□□□□ 0.28
USP11P51784 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.77■□□□□ 0.28
USP11P51784 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 FAM58BP-201ENST00000439056 645 ntBASIC16.77■□□□□ 0.28
USP11P51784 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 PFN1P12-201ENST00000455938 534 ntBASIC16.77■□□□□ 0.28
USP11P51784 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.77■□□□□ 0.28
USP11P51784 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.77■□□□□ 0.28
USP11P51784 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
USP11P51784 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.77■□□□□ 0.28
USP11P51784 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 AC091271.1-201ENST00000611877 1162 ntBASIC16.77■□□□□ 0.28
USP11P51784 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.77■□□□□ 0.28
USP11P51784 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms