Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.34
HCFC1P51610 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HCFC1P51610 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HCFC1P51610 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
HCFC1P51610 LINC02228-204ENST00000642115 2962 ntBASIC12.9□□□□□ -0.35
HCFC1P51610 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HCFC1P51610 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.9□□□□□ -0.35
HCFC1P51610 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HCFC1P51610 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.9□□□□□ -0.35
HCFC1P51610 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
HCFC1P51610 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.9□□□□□ -0.35
HCFC1P51610 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HCFC1P51610 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 RNA5SP359-201ENST00000364838 113 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 AL645933.1-201ENST00000440087 609 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.89□□□□□ -0.35
HCFC1P51610 PIN4P1-201ENST00000451079 396 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC12.89□□□□□ -0.35
HCFC1P51610 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.89□□□□□ -0.35
HCFC1P51610 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.89□□□□□ -0.35
HCFC1P51610 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.89□□□□□ -0.35
HCFC1P51610 DNM1P30-201ENST00000563586 452 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 AC008825.2-201ENST00000603374 718 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 AC007881.3-201ENST00000608897 607 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.89□□□□□ -0.35
HCFC1P51610 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 AC074138.1-201ENST00000611182 1303 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 AP000845.1-201ENST00000581677 2131 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC12.89□□□□□ -0.35
HCFC1P51610 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.89□□□□□ -0.35
HCFC1P51610 AL109837.1-201ENST00000603272 613 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 BX088702.1-201ENST00000610784 235 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 AC025262.2-201ENST00000623975 1056 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 AC012508.2-201ENST00000567613 1472 ntBASIC12.89□□□□□ -0.35
HCFC1P51610 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.89□□□□□ -0.35
HCFC1P51610 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HCFC1P51610 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HCFC1P51610 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HCFC1P51610 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HCFC1P51610 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.88□□□□□ -0.35
HCFC1P51610 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.88□□□□□ -0.35
HCFC1P51610 AL627422.1-201ENST00000434104 580 ntBASIC12.88□□□□□ -0.35
HCFC1P51610 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms