Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.13□□□□□ -0.15
KNTC1P50748 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC14.13□□□□□ -0.15
KNTC1P50748 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
KNTC1P50748 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
KNTC1P50748 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 LYPLA2P1-203ENST00000447689 696 ntBASIC14.12□□□□□ -0.15
KNTC1P50748 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KNTC1P50748 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
KNTC1P50748 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.12□□□□□ -0.15
KNTC1P50748 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.12□□□□□ -0.15
KNTC1P50748 AC138696.2-201ENST00000607376 223 ntBASIC14.12□□□□□ -0.15
KNTC1P50748 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
KNTC1P50748 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.12□□□□□ -0.15
KNTC1P50748 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.12□□□□□ -0.15
KNTC1P50748 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.12□□□□□ -0.15
KNTC1P50748 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 FLJ16779-201ENST00000612722 7638 ntBASIC14.12□□□□□ -0.15
KNTC1P50748 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.12□□□□□ -0.15
KNTC1P50748 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.12□□□□□ -0.15
KNTC1P50748 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.12□□□□□ -0.15
KNTC1P50748 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
KNTC1P50748 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
KNTC1P50748 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
KNTC1P50748 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.11□□□□□ -0.15
KNTC1P50748 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.11□□□□□ -0.15
KNTC1P50748 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
KNTC1P50748 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.11□□□□□ -0.15
KNTC1P50748 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.11□□□□□ -0.15
KNTC1P50748 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
KNTC1P50748 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.11□□□□□ -0.15
KNTC1P50748 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.11□□□□□ -0.15
KNTC1P50748 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.11□□□□□ -0.15
KNTC1P50748 REEP5-205ENST00000504247 480 ntTSL 5 BASIC14.11□□□□□ -0.15
KNTC1P50748 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 AC103810.10-201ENST00000606504 343 ntBASIC14.11□□□□□ -0.15
KNTC1P50748 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.11□□□□□ -0.15
KNTC1P50748 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.11□□□□□ -0.15
KNTC1P50748 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.11□□□□□ -0.15
KNTC1P50748 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KNTC1P50748 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms